https://www.make.md/docs/Getting%20Started/Organizing%20Files
**supporting folders:**
.archive
.templates
.resources
**folders for publication:**
data (public data repository)
docs (supplementary files)
src (github)
#### research #root
-  README.ipynb
##### :LiFolder: systematic review
1. :LiFolder: protocol
:LiFolder: prospero
- February 9th 2026 [version 2.0](https://www.crd.york.ac.uk/prospero/view/CRD42024592549/2/0)
- October 15th 2024 [version 1.1](https://www.crd.york.ac.uk/prospero/view/CRD42024592549/1/1)
- October 15th 2024 [version 1.0](https://www.crd.york.ac.uk/prospero/view/CRD42024592549/1/1)
:LiFolder: cochrane
2. :LiFolder: search strategy
1. :LiFolder: pubmed
1. [pm_bptb.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_bptb.txt)
2. [pm_ht.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_ht.txt)
3. [pm_qt.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_qt.txt)
4. [pm_plt.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_plt.txt)
5. [pm_at.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_at.txt)
6. [pm_ta.txt](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_ta.txt)
2. :LiFolder: embase
1. em_bptb.txt
2. em_ht.txt
3. em_qt.txt
4. em_plt.txt
5. em_at.txt
6. em_ta.txt
3. :LiFolder: web of science
1. wos_bptb.txt
2. wos_ht.txt
3. wos_qt.txt
4. wos_plt.txt
5. wos_at.txt
6. wos_ta.txt
3. :LiFolder: search
1. :LiFolder: pubmed
1. [pm_bptb.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_bptb.csv)
2. [pm_ht.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_ht.csv)
3. [pm_qt.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_qt.csv)
4. [pm_plt.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_plt.csv)
5. [pm_at.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_at.csv)
6. [pm_ta.csv](https://github.com/dong-wkim/dong-wkim.github.io/blob/master/pm_ta.csv)
2. :LiFolder: embase
1. em_bptb.csv
2. em_ht.csv
3. em_qt.csv
4. em_plt.csv
5. em_at.csv
6. em_ta.csv
3. :LiFolder: web of science
1. wos_bptb.csv
2. wos_ht.csv
3. wos_qt.csv
4. wos_plt.csv
5. wos_at.csv
6. wos_ta.csv
4. :LiFileSpreadsheet: embase.csv
5. :LiFileSpreadsheet: pubmed.csv
6. :LiFileSpreadsheet: wos.csv
4. :LiFolder: deduplication
1. :LiFolder: doi
1. doi_nulls.csv
2. doi_removed.csv
3. doi_deduplicated.csv
2. :LiFolder: key
1. key_nulls.csv
2. key_removed.csv
3. key_deduplicated.csv
3. :LiFolder: id
1. id_nulls.csv
2. id_removed.csv
3. id_deduplicated.csv
5. :LiFolder: screening
1. :LiFolder: title and abstract screening
1. title_abstract_screening.csv
2. :LiFolder: PDF
3. :LiFolder: full-text screening
1. full-text_screening.csv
##### :LiFolder: data
6. :LiFolder: database design
7. :LiFolder: data entry form
8. :LiFolder: data collection
9. :LiFolder: data transformation
10. :LiFolder: risk of bias assessment
##### :LiFolder: meta-analysis
6. :LiFolder: meta-analysis
7. :LiFolder: meta-regression
8. :LiFolder: network meta-analysis
##### :LiFolder: manuscript
14. :LiFolder: tables and figures
15. :LiFolder: results
16. :LiFolder: methods
17. :LiFolder: introduction
18. :LiFolder: discussion
19. :LiFolder: abstract
revision
submission